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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1309: 9677 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 893603 to 895450
9677
mRNA_1310: 9678 - KOG3022 Predicted ATPase, nucleotide-binding, at 895726 to 897428
9678
mRNA_1311: 9679 - K11599 POMP, UMP1 proteasome maturation protein, at 897559 to 898408
9679
mRNA_1312: 9680 - KOG4690 Uncharacterized conserved protein, at 898611 to 899248
9680
mRNA_1313: 9681 - K18586 COQ4 ubiquinone biosynthesis protein COQ4, at 899642 to 900633
9681
Group
Condition
mRNA_1309
mRNA_1310
mRNA_1311
mRNA_1312
mRNA_1313
9677
9678
9679
9680
9681
growth on ypd
YPD
-1.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.8
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
0.4
growth on oleic acid
YNB Glucose
-0.4
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.4
0.1
growth on ricinoleic acid
YNB Glucose
0.3
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.1
auxotrophy
YNB Glucose
-0.1
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.4
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.2
auxotrophy
Dropout Complete
-0.1
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.1
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