Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1296: 9664 - K19703 FA2H, SCS7 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase, at 856418 to 857945 9664 mRNA_1297: 9665 - K17292 TBCA tubulin-specific chaperone A, at 858467 to 858877 9665 mRNA_1298: 9666 - HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF13881,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SUPERFAMILY--SSF54236, at 859180 to 859998 9666 mRNA_1299: 9667 - K00600 glyA, SHMT glycine hydroxymethyltransferase, at 860509 to 862713 9667 mRNA_1300: 9668 - BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy..., at 862697 to 864122 9668
Group Condition mRNA_1296 mRNA_1297 mRNA_1298 mRNA_1299 mRNA_1300
9664
9665
9666
9667
9668
facs on lipid accumulation Sorted Low BODIPY Gate   -1.3 -0.2 -5.6 -1.1
auxotrophy YNB Glucose 75mM Arginine   -0.5 -0.2 -5.7 -0.4
facs on lipid accumulation Sorted High BODIPY Gate   -1.1 -0.2 -4.5 -1.0
auxotrophy YNB Glucose   -0.4 -0.0 -5.8 -0.3
auxotrophy YNB Glucose 75mM Methionine   -0.5 -0.1 -4.8 -0.3
facs on lipid accumulation Sorted No BODIPY Gate   -0.3 0.1 -4.6 -0.9
growth on ricinoleic acid YNB Glucose   -0.3 -0.1 -3.8 -0.7
auxotrophy Dropout Complete   0.1 -0.2 -3.7 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.6 -0.2 -3.1 -0.3
growth on oleic acid YNB Glucose   0.1 -0.1 -3.8 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.0 -0.1 -2.5 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 -0.0 -2.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid   0.5 -0.2 -2.0 -0.6
growth on ypd YPD   1.3 -0.2 -2.5 -0.5
growth on oleic acid YNB Oleic Acid   -0.2 -0.1 -0.9 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   0.3 -0.1 -0.4 -0.6
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.1 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.5 -0.1 0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy   0.0 0.1 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation   -1.0 -0.2 1.0 0.0
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.1 0.8 -0.3
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