Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1290: 9658 - K03872 TCEB1 transcription elongation factor B, polypeptide 1, at 844469 to 844987 9658 mRNA_1291: 9659 - KOG3350 Uncharacterized conserved protein, at 845100 to 846215 9659 mRNA_1292: 9660 - K10848 ERCC4, XPF DNA excision repair protein ERCC-4, at 846383 to 850419 9660 mRNA_1293: 9661 - Hypothetical Protein, at 850858 to 851999 9661 mRNA_1294: 9662 - K20369 ERV29, SURF4 ER-derived vesicles protein, at 852831 to 853984 9662
Group Condition mRNA_1290 mRNA_1291 mRNA_1292 mRNA_1293 mRNA_1294
9658
9659
9660
9661
9662
facs on lipid accumulation Sorted Low BODIPY Gate -1.5   -1.2 -0.1 -2.4
ypd buoyancy 40 hrs No Buoyancy Separation -2.8   0.3 0.1 -1.3
facs on lipid accumulation Sorted High BODIPY Gate -0.5   -0.8 -0.0 -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.0   0.1 -0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.0   -1.3 0.2 -0.9
growth on ypd YPD -0.2   0.2 -0.5 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.3   -0.6 0.2 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0   -0.3 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.0 -0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.0 -0.4 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2   0.2 0.2 -0.4
auxotrophy YNB Glucose 0.6   0.1 -0.6 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3   -0.0 0.3 0.0
growth on oleic acid YNB Oleic Acid 0.5   -0.2 0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.9   -0.1 0.3 0.7
auxotrophy YNB Glucose 75mM Arginine 0.4   0.2 -0.5 0.0
growth on oleic acid YNB Glucose 0.3   -0.0 0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.2 -0.2 0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7   -0.2 -0.3 0.3
growth on ricinoleic acid YNB Glucose 0.9   0.2 -0.2 0.2
auxotrophy Dropout Complete 1.7   0.3 -0.7 0.3
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