Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1286: 9654 - HMMPfam-short chain dehydrogenase-PF00106,SUPERFAMILY--SSF51735, at 834621 to 836012 9654 mRNA_1287: 9655 - KOG1087 Cytosolic sorting protein GGA2/TOM1, at 836321 to 838675 9655 mRNA_1288: 9656 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 839397 to 840221 9656 mRNA_1289: 9657 - K05681 ABCG2, CD338 ATP-binding cassette, subfamily G (WHITE), member 2, at 840459 to 844214 9657 mRNA_1290: 9658 - K03872 TCEB1 transcription elongation factor B, polypeptide 1, at 844469 to 844987 9658
Group Condition mRNA_1286 mRNA_1287 mRNA_1288 mRNA_1289 mRNA_1290
9654
9655
9656
9657
9658
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -2.8 -0.4 0.1 -1.5
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -3.1 -0.0 0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -2.5 -0.2 0.2 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.2 -0.3 0.8 -2.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -1.2 0.3 -0.0 -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.6 -0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.5 0.2 -0.2 -2.0
growth on oleic acid YNB Oleic Acid -0.6 -0.7 -0.1 0.0 0.5
growth on ypd YPD -0.1 0.3 -0.6 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.4 -0.1 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.5 -0.2 -0.0 0.4
growth on oleic acid YNB Glucose -0.3 -0.1 -0.1 -0.2 0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 -0.0 0.0 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.7 0.1 -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.7 -0.0 -0.1 -0.2
auxotrophy YNB Glucose 0.1 0.0 0.1 -0.1 0.6
growth on ricinoleic acid YNB Glucose -0.3 0.3 0.1 -0.3 0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.3 0.6 0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.1 0.7 -0.0 0.0
auxotrophy Dropout Complete 0.0 -0.0 -0.1 -0.2 1.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.1 0.1 0.4 -0.2 0.7
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