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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265
9647
mRNA_1280: 9648 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657, at 825311 to 827101
9648
mRNA_1281: 9649 - HMMPfam-Peptidase M50B-like-PF13398, at 827341 to 829667
9649
mRNA_1282: 9650 - Hypothetical Protein, at 829731 to 830277
9650
mRNA_1283: 9651 - K02883 RP-L18e, RPL18 large subunit ribosomal protein L18e, at 830551 to 831805
9651
Group
Condition
mRNA_1279
mRNA_1280
mRNA_1281
mRNA_1282
mRNA_1283
9647
9648
9649
9650
9651
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-2.6
-0.2
-2.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.2
-0.6
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-1.7
-0.5
0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-1.3
-0.2
0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.1
0.2
-1.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.1
0.1
-1.2
growth on oleic acid
YNB Glucose
0.0
0.1
0.0
-0.8
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.3
-0.3
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.2
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
-0.1
0.1
-0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.2
0.1
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
0.1
0.5
growth on ypd
YPD
-0.1
0.0
0.5
0.0
growth on ricinoleic acid
YNB Glucose
0.1
-0.4
-0.0
0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.3
-0.2
0.7
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.1
0.1
0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.2
-0.5
1.0
auxotrophy
YNB Glucose
0.0
0.3
-0.0
1.3
auxotrophy
Dropout Complete
0.2
0.6
-0.1
1.0
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