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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1276: 9644 - K01070 frmB, ESD, fghA S-formylglutathione hydrolase, at 815898 to 817599
9644
mRNA_1277: 9645 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 817751 to 818897
9645
mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830
9646
mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265
9647
mRNA_1280: 9648 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657, at 825311 to 827101
9648
Group
Condition
mRNA_1276
mRNA_1277
mRNA_1278
mRNA_1279
mRNA_1280
9644
9645
9646
9647
9648
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.7
0.1
0.2
-2.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.5
0.3
0.3
-1.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.1
-0.1
0.0
-1.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.4
0.0
-0.2
0.1
growth on oleic acid
YNB Oleic Acid
0.0
-0.7
-0.1
-0.1
0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.0
-0.4
0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.9
0.1
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.5
-0.4
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.1
-0.2
-0.1
-0.1
growth on ypd
YPD
0.5
-0.2
-0.4
-0.1
0.0
growth on oleic acid
YNB Glucose
0.1
-0.3
-0.0
0.0
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
0.7
-0.5
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.2
0.1
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.5
-0.4
0.2
0.3
auxotrophy
Dropout Complete
0.2
-0.2
-0.6
0.2
0.6
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
-0.1
0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.2
-0.5
0.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.0
0.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.3
0.2
0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-0.0
-0.1
0.4
0.2
auxotrophy
YNB Glucose
0.3
0.6
-0.5
0.0
0.3
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