Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1272: 9640 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 807645 to 808575 9640 mRNA_1273: 9641 - BLAST priB [Histoplasma capsulatum H143], at 808747 to 810374 9641 mRNA_1274: 9642 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 810580 to 813182 9642 mRNA_1275: 9643 - K11426 SMYD SET and MYND domain-containing protein, at 813494 to 815725 9643 mRNA_1276: 9644 - K01070 frmB, ESD, fghA S-formylglutathione hydrolase, at 815898 to 817599 9644
Group Condition mRNA_1272 mRNA_1273 mRNA_1274 mRNA_1275 mRNA_1276
9640
9641
9642
9643
9644
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 0.0 -0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 -0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 0.1 0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.2 0.0 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.4 -0.0 0.1 0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.3 0.2 0.0 -0.0
auxotrophy Dropout Complete 0.3 -0.4 -0.0 0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 0.2 -0.1 0.1
auxotrophy YNB Glucose 0.1 -0.3 0.1 -0.0 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 -0.0 0.1 0.5
growth on oleic acid YNB Oleic Acid 0.3 0.0 -0.1 0.2 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.3 0.2 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.2 -0.2 0.2 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.0 0.1 0.1 -0.0
growth on ypd YPD 0.8 -0.1 -0.4 -0.1 0.5
growth on oleic acid YNB Glucose 0.2 0.2 0.1 0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.7 -0.1 -0.1 0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.9 -0.5 0.4 -0.1 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.6 0.1 -0.2 0.3 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 0.1 0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 0.1 0.1 0.2 0.1
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