Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1267: 9635 - K00814 GPT, ALT alanine transaminase, at 793138 to 795041 9635 mRNA_1268: 9636 - K03790 rimJ ribosomal-protein-alanine N-acetyltransferase, at 795406 to 796307 9636 mRNA_1269: 9637 - K15628 PXA ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein, at 796569 to 799890 9637 mRNA_1270: 9638 - KOG0254 Predicted transporter (major facilitator superfamily), at 800593 to 802936 9638 mRNA_1271: 9639 - K05349 bglX beta-glucosidase, at 803420 to 806888 9639
Group Condition mRNA_1267 mRNA_1268 mRNA_1269 mRNA_1270 mRNA_1271
9635
9636
9637
9638
9639
growth on ricinoleic acid YNB Ricinoleic Acid -5.0 -0.2 -0.0 0.1 0.2
growth on oleic acid YNB Oleic Acid -3.0 -0.4 -1.0 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -3.1 -0.0 -0.2 -0.2 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -3.6 0.1 0.1 0.1 -0.0
growth on oleic acid YNB Glucose -3.0 0.0 -0.2 -0.1 0.1
auxotrophy YNB Glucose -2.9 0.2 -0.1 0.0 -0.2
growth on ricinoleic acid YNB Glucose -3.0 0.3 -0.1 0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -2.3 0.2 -0.0 0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 -0.2 0.4 0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.3 0.0 0.3 -0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.0 -0.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.3 -0.1 -0.4 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 0.2 -0.1 -0.0
auxotrophy Dropout Complete -0.7 0.1 0.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.4 -0.1 -0.3 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.3 -0.0 -0.2 0.1
growth on ypd YPD -0.3 0.2 -0.0 0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.7 0.4 -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2 -0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.4 0.3 0.2 0.0
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