Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1264: 9632 - HMMPfam-Mitochondrial ribosomal protein subunit L20-PF12824, at 783698 to 784459 9632 mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784543 to 790877 9633 mRNA_1266: 9634 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 791102 to 792635 9634 mRNA_1267: 9635 - K00814 GPT, ALT alanine transaminase, at 793138 to 795041 9635 mRNA_1268: 9636 - K03790 rimJ ribosomal-protein-alanine N-acetyltransferase, at 795406 to 796307 9636
Group Condition mRNA_1264 mRNA_1265 mRNA_1266 mRNA_1267 mRNA_1268
9632
9633
9634
9635
9636
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -1.3 -0.7 -5.0 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -2.0 -0.3 -3.1 -0.0
growth on oleic acid YNB Oleic Acid 0.0 -0.9 -1.1 -3.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.9 -1.1 -3.6 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -2.3 0.1 -2.3 0.2
growth on ricinoleic acid YNB Glucose 0.5 -0.8 -1.2 -3.0 0.3
growth on oleic acid YNB Glucose 0.1 -0.6 -0.7 -3.0 0.0
auxotrophy YNB Glucose 0.2 -1.3 -0.1 -2.9 0.2
auxotrophy Dropout Complete -0.2 -1.2 -1.0 -0.7 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.6 0.5 -1.9 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1 -0.0 -1.3 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.3 0.1 -0.6 -0.0
growth on ypd YPD 0.4 -0.7 0.3 -0.3 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.5 0.7 0.1 -0.7
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.4 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.3 0.2 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.7 0.0 -0.5 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.1 0.3 -0.2 0.4
ypd buoyancy 40 hrs High Buoyancy 0.4 0.2 0.2 0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 1.1 -0.5 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.8 0.3 -0.3 0.3
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