Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1263: 9631 - K06130 LYPLA2 lysophospholipase II, at 782267 to 783226 9631 mRNA_1264: 9632 - HMMPfam-Mitochondrial ribosomal protein subunit L20-PF12824, at 783698 to 784459 9632 mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784543 to 790877 9633 mRNA_1266: 9634 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 791102 to 792635 9634 mRNA_1267: 9635 - K00814 GPT, ALT alanine transaminase, at 793138 to 795041 9635
Group Condition mRNA_1263 mRNA_1264 mRNA_1265 mRNA_1266 mRNA_1267
9631
9632
9633
9634
9635
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.5 -1.3 -0.7 -5.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.4 -0.9 -1.1 -3.6
growth on oleic acid YNB Oleic Acid -0.0 0.0 -0.9 -1.1 -3.0
growth on ricinoleic acid YNB Glucose -0.2 0.5 -0.8 -1.2 -3.0
auxotrophy YNB Glucose 75mM Arginine 0.6 0.1 -2.0 -0.3 -3.1
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 -2.3 0.1 -2.3
auxotrophy YNB Glucose 0.2 0.2 -1.3 -0.1 -2.9
growth on oleic acid YNB Glucose 0.2 0.1 -0.6 -0.7 -3.0
auxotrophy Dropout Complete 0.0 -0.2 -1.2 -1.0 -0.7
growth on ypd YPD -0.7 0.4 -0.7 0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.4 0.3 0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.5 0.2 0.1 -0.0 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -0.1 0.6 0.5 -1.9
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.1 0.7 0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.2 0.1 0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.2 0.4 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 0.1 1.1 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.2 0.4 0.2 0.2 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.3 0.3 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2 0.8 0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.5 -0.5 0.7 0.1
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