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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1259: 9627 - K10887 DCLRE1C, ARTEMIS, SCIDA DNA cross-link repair 1C protein, at 771743 to 774831
9627
mRNA_1260: 9628 - Hypothetical Protein, at 775033 to 777519
9628
mRNA_1261: 9629 - K04712 DEGS sphingolipid Delta-4 desaturase, at 778890 to 780707
9629
mRNA_1262: 9630 - KOG4781 Uncharacterized conserved protein, at 780962 to 782100
9630
mRNA_1263: 9631 - K06130 LYPLA2 lysophospholipase II, at 782267 to 783226
9631
Group
Condition
mRNA_1259
mRNA_1260
mRNA_1261
mRNA_1262
mRNA_1263
9627
9628
9629
9630
9631
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.9
-4.3
-0.2
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.8
-3.1
-0.4
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.5
-1.0
-0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.9
-0.2
-0.2
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.7
0.4
0.1
0.2
growth on ricinoleic acid
YNB Glucose
0.2
0.6
-0.8
0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.9
-0.8
-0.5
0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
-0.3
0.2
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.1
0.1
0.1
0.4
growth on oleic acid
YNB Glucose
0.3
0.8
-0.5
-0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.3
0.1
0.1
0.5
growth on ypd
YPD
0.1
0.4
1.1
0.2
-0.7
auxotrophy
YNB Glucose
0.4
0.9
-0.1
-0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.8
-0.0
-0.3
0.6
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.8
0.6
-0.3
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.6
1.0
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
1.1
1.2
-0.1
0.0
growth on oleic acid
YNB Oleic Acid
0.4
1.4
1.2
-0.2
-0.0
auxotrophy
Dropout Complete
0.4
1.0
1.9
-0.5
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.5
1.6
0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
1.0
1.9
0.5
0.1
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