Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1257: 9625 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 768823 to 770242 9625 mRNA_1258: 9626 - Hypothetical Protein, at 770373 to 771317 9626 mRNA_1259: 9627 - K10887 DCLRE1C, ARTEMIS, SCIDA DNA cross-link repair 1C protein, at 771743 to 774831 9627 mRNA_1260: 9628 - Hypothetical Protein, at 775033 to 777519 9628 mRNA_1261: 9629 - K04712 DEGS sphingolipid Delta-4 desaturase, at 778890 to 780707 9629
Group Condition mRNA_1257 mRNA_1258 mRNA_1259 mRNA_1260 mRNA_1261
9625
9626
9627
9628
9629
facs on lipid accumulation Sorted Low BODIPY Gate 0.0   0.3 0.9 -4.3
facs on lipid accumulation Sorted No BODIPY Gate 0.0   0.3 0.8 -3.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7   0.1 -0.9 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   -0.2 -0.7 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.1   0.1 0.5 -1.0
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.0 -0.1 0.1
growth on ricinoleic acid YNB Glucose 0.0   0.2 0.6 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.0   0.2 0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.0   0.4 0.9 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.0   0.2 0.3 0.1
growth on oleic acid YNB Glucose -0.2   0.3 0.8 -0.5
auxotrophy YNB Glucose 0.1   0.4 0.9 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.3   0.4 0.8 -0.0
growth on ypd YPD -0.2   0.1 0.4 1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   0.1 0.6 1.0
auxotrophy YNB Glucose 75mM Methionine 0.0   0.2 0.8 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   0.3 0.5 1.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   0.4 1.1 1.2
growth on oleic acid YNB Oleic Acid -0.2   0.4 1.4 1.2
auxotrophy Dropout Complete -0.0   0.4 1.0 1.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.4 1.0 1.9
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