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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1242: 9610 - K01110 PTEN phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, at 736191 to 738180
9610
mRNA_1243: 9611 - K02493 hemK, prmC, HEMK release factor glutamine methyltransferase, at 738287 to 739305
9611
mRNA_1244: 9612 - SUPERFAMILY--SSF52047, at 739687 to 741319
9612
mRNA_1245: 9613 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 741721 to 743435
9613
mRNA_1246: 9614 - SUPERFAMILY--SSF52047, at 743488 to 744876
9614
Group
Condition
mRNA_1242
mRNA_1243
mRNA_1244
mRNA_1245
mRNA_1246
9610
9611
9612
9613
9614
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
0.1
-4.4
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.4
0.1
-1.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.3
-0.0
-1.9
0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.5
-0.1
-0.4
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.9
0.1
0.9
-0.7
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.1
-0.1
-0.1
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.4
0.4
-0.1
-0.5
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.6
0.3
-0.1
-0.4
growth on ricinoleic acid
YNB Glucose
0.1
0.7
0.2
-0.9
0.3
auxotrophy
YNB Glucose
-0.0
0.7
0.2
-0.7
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.1
0.3
-0.9
0.8
growth on oleic acid
YNB Glucose
0.2
0.5
0.2
-0.4
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.4
0.1
0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
1.0
0.1
-0.5
0.2
growth on ypd
YPD
0.6
0.5
0.2
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.5
0.1
1.1
-0.4
auxotrophy
Dropout Complete
-0.2
0.5
0.0
0.1
0.7
growth on oleic acid
YNB Oleic Acid
0.2
0.5
0.1
0.3
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
0.1
0.3
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.8
0.3
-0.3
1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
1.1
0.1
0.3
0.4
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