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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1241: 9609 - K12893 SFRS4_5_6 splicing factor, arginine/serine-rich 4/5/6, at 734372 to 735961
9609
mRNA_1242: 9610 - K01110 PTEN phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, at 736191 to 738180
9610
mRNA_1243: 9611 - K02493 hemK, prmC, HEMK release factor glutamine methyltransferase, at 738287 to 739305
9611
mRNA_1244: 9612 - SUPERFAMILY--SSF52047, at 739687 to 741319
9612
mRNA_1245: 9613 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 741721 to 743435
9613
Group
Condition
mRNA_1241
mRNA_1242
mRNA_1243
mRNA_1244
mRNA_1245
9609
9610
9611
9612
9613
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.2
-0.0
-0.2
0.1
-4.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
0.1
0.3
-0.0
-1.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.4
0.4
0.1
-1.3
growth on ricinoleic acid
YNB Glucose
-1.1
0.1
0.7
0.2
-0.9
auxotrophy
Dropout Complete
-1.0
-0.2
0.5
0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
0.5
-0.1
0.3
-0.9
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
-0.5
-0.1
-0.4
auxotrophy
YNB Glucose
-0.8
-0.0
0.7
0.2
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-1.1
0.1
0.2
0.1
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.2
-0.9
0.1
0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.1
1.0
0.1
-0.5
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
-0.1
-0.1
-0.1
growth on oleic acid
YNB Glucose
-0.4
0.2
0.5
0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.0
0.8
0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
0.6
0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.4
0.4
0.4
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.3
0.4
0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.2
0.5
0.1
1.1
growth on oleic acid
YNB Oleic Acid
-0.1
0.2
0.5
0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.1
1.1
0.1
0.3
growth on ypd
YPD
0.5
0.6
0.5
0.2
-0.1
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