Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699587 to 703104 9596 mRNA_1229: 9597 - SUPERFAMILY--SSF52047, at 703452 to 704884 9597 mRNA_1230: 9598 - K03267 ERF3, GSPT peptide chain release factor subunit 3, at 705934 to 708882 9598 mRNA_1231: 9599 - K11086 SNRPB, SMB small nuclear ribonucleoprotein B and B', at 709057 to 710079 9599 mRNA_1232: 9600 - K12177 COPS3, CSN3 COP9 signalosome complex subunit 3, at 710443 to 712961 9600
Group Condition mRNA_1228 mRNA_1229 mRNA_1230 mRNA_1231 mRNA_1232
9596
9597
9598
9599
9600
growth on ricinoleic acid YNB Ricinoleic Acid -2.8 0.0     -1.2
ypd buoyancy 40 hrs Low Buoyancy -3.9 0.1     0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.7 -0.4     -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2     -1.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 0.3     -0.6
growth on oleic acid YNB Oleic Acid -1.1 0.1     -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1     -0.9
growth on ricinoleic acid YNB Glucose 0.3 -0.1     -1.2
ypd buoyancy 40 hrs Median Buoyancy -0.6 -0.0     -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2     -0.9
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.1     -0.3
auxotrophy YNB Glucose 75mM Methionine 0.4 0.0     -0.8
auxotrophy YNB Glucose 0.5 0.1     -0.7
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.1     -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1     0.0
growth on ypd YPD -0.0 -0.2     0.1
auxotrophy Dropout Complete 0.6 0.0     -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2     0.2
auxotrophy YNB Glucose 75mM Arginine 0.3 0.0     -0.4
growth on oleic acid YNB Glucose 0.6 -0.0     -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.0     0.2
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