Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696629 to 699042 9595 mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699587 to 703104 9596 mRNA_1229: 9597 - SUPERFAMILY--SSF52047, at 703452 to 704884 9597 mRNA_1230: 9598 - K03267 ERF3, GSPT peptide chain release factor subunit 3, at 705934 to 708882 9598 mRNA_1231: 9599 - K11086 SNRPB, SMB small nuclear ribonucleoprotein B and B', at 709057 to 710079 9599
Group Condition mRNA_1227 mRNA_1228 mRNA_1229 mRNA_1230 mRNA_1231
9595
9596
9597
9598
9599
ypd buoyancy 40 hrs Low Buoyancy 0.3 -3.9 0.1    
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -2.8 0.0    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -1.7 -0.4    
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.3 0.3    
growth on oleic acid YNB Oleic Acid -0.0 -1.1 0.1    
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.6 -0.0    
auxotrophy YNB Glucose 75mM Arginine -0.8 0.3 0.0    
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.1 0.2    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.1 -0.2    
auxotrophy YNB Glucose -0.7 0.5 0.1    
auxotrophy Dropout Complete -0.8 0.6 0.0    
growth on ricinoleic acid YNB Glucose -0.3 0.3 -0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 -0.4 -0.2    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.3 0.1    
auxotrophy YNB Glucose 75mM Methionine -0.3 0.4 0.0    
facs on lipid accumulation Sorted No BODIPY Gate 0.6 -0.3 -0.1    
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -0.4 0.1    
growth on oleic acid YNB Glucose -0.2 0.6 -0.0    
ypd buoyancy 40 hrs High Buoyancy 0.1 0.4 -0.1    
growth on ypd YPD 0.6 -0.0 -0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.2 -0.0    
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