Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1224: 9592 - BLAST catalytic [Ascochyta rabiei], at 690092 to 691295 9592 mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691442 to 693362 9593 mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693784 to 696236 9594 mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696629 to 699042 9595 mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699587 to 703104 9596
Group Condition mRNA_1224 mRNA_1225 mRNA_1226 mRNA_1227 mRNA_1228
9592
9593
9594
9595
9596
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.4 0.0 0.3 -3.9
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.3 -0.1 0.5 -2.8
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.5 0.1 0.2 -1.7
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.4 -0.0 -1.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.6 0.2 -0.1 -1.3
growth on ricinoleic acid YNB Glucose -0.3 -0.4 -0.6 -0.3 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.9 -0.2 0.5 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.5 -0.2 -0.8 0.3
auxotrophy YNB Glucose -0.0 -0.2 -0.5 -0.7 0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.2 -0.2 -0.5 -0.1
auxotrophy Dropout Complete 0.0 -0.2 -0.4 -0.8 0.6
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.5 0.0 0.1 -0.6
growth on oleic acid YNB Glucose -0.0 -0.2 -0.5 -0.2 0.6
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.7 0.2 0.1 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.4 0.0 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 -0.1 -0.3 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.2 0.2 0.6 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.2 0.3 0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.2 0.2 0.6 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.3 0.0 0.4 0.2
growth on ypd YPD 0.8 0.5 -0.0 0.6 -0.0
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