Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1219: 9587 - KOG3202 SNARE protein TLG1/Syntaxin 6, at 675233 to 676117 9587 mRNA_1220: 9588 - KOG0254 Predicted transporter (major facilitator superfamily), at 676707 to 679515 9588 mRNA_1221: 9589 - K01810 GPI, pgi glucose-6-phosphate isomerase, at 679841 to 682126 9589 mRNA_1222: 9590 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 682421 to 686506 9590 mRNA_1223: 9591 - PRINTS-Proline rich extensin signature-PR01217, at 687384 to 689890 9591
Group Condition mRNA_1219 mRNA_1220 mRNA_1221 mRNA_1222 mRNA_1223
9587
9588
9589
9590
9591
growth on ricinoleic acid YNB Ricinoleic Acid   -1.2   0.4 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0   -0.3 -0.8
growth on ricinoleic acid YNB Glucose   -0.2   -0.3 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.4   0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine   0.0   -0.0 -0.5
facs on lipid accumulation Sorted No BODIPY Gate   -0.1   -0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy   -0.1   0.1 -0.3
growth on oleic acid YNB Glucose   -0.1   -0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate   -0.1   -0.2 0.0
auxotrophy YNB Glucose   -0.2   0.2 -0.3
growth on oleic acid YNB Oleic Acid   0.0   0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy   0.1   -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.0   0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.0   -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1   0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine   -0.1   0.3 -0.2
auxotrophy Dropout Complete   -0.1   0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1   0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate   -0.3   -0.0 0.4
ypd buoyancy 40 hrs High Buoyancy   0.2   0.2 -0.1
growth on ypd YPD   0.3   0.3 -0.1
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