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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1218: 9586 - SUPERFAMILY--SSF52047, at 673379 to 675043
9586
mRNA_1219: 9587 - KOG3202 SNARE protein TLG1/Syntaxin 6, at 675233 to 676117
9587
mRNA_1220: 9588 - KOG0254 Predicted transporter (major facilitator superfamily), at 676707 to 679515
9588
mRNA_1221: 9589 - K01810 GPI, pgi glucose-6-phosphate isomerase, at 679841 to 682126
9589
mRNA_1222: 9590 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 682421 to 686506
9590
Group
Condition
mRNA_1218
mRNA_1219
mRNA_1220
mRNA_1221
mRNA_1222
9586
9587
9588
9589
9590
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.4
-0.3
-0.0
growth on ricinoleic acid
YNB Glucose
0.0
-0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-1.2
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.1
auxotrophy
YNB Glucose
-0.1
-0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.4
0.1
auxotrophy
Dropout Complete
0.1
-0.1
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.1
0.0
0.0
growth on oleic acid
YNB Glucose
0.4
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-0.0
0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.1
0.1
growth on ypd
YPD
0.2
0.3
0.3
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