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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1210: 9578 - K13076 SLD Delta8-fatty-acid desaturase, at 657953 to 659955
9578
mRNA_1211: 9579 - K15078 SLX1 structure-specific endonuclease subunit SLX1, at 660116 to 662467
9579
mRNA_1212: 9580 - HMMPfam-Regulator of G protein signaling domain-PF00615,ProSiteProfiles-RGS domain profile.-PS50132,SMART-Regulator of G protein signalling domain-SM00315,SUPERFAMILY--SSF48097, at 663108 to 664692
9580
mRNA_1213: 9581 - KOG1205 Predicted dehydrogenase, at 665089 to 665972
9581
mRNA_1214: 9582 - Hypothetical Protein, at 666244 to 666423
9582
Group
Condition
mRNA_1210
mRNA_1211
mRNA_1212
mRNA_1213
mRNA_1214
9578
9579
9580
9581
9582
growth on oleic acid
YNB Oleic Acid
-0.2
-0.6
-0.9
ypd buoyancy
40 hrs High Buoyancy
0.3
0.2
-1.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.3
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.1
-0.4
growth on oleic acid
YNB Glucose
0.1
0.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.5
-0.2
0.2
growth on ypd
YPD
-0.1
1.7
-1.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.3
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.0
0.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
0.3
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
1.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.0
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.2
0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.3
1.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
-0.5
1.4
growth on ricinoleic acid
YNB Glucose
0.1
0.5
1.1
auxotrophy
YNB Glucose
0.9
0.3
0.6
auxotrophy
YNB Glucose 75mM Methionine
0.6
1.3
0.3
auxotrophy
Dropout Complete
1.2
0.7
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.9
0.9
0.8
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