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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1198: 9566 - Hypothetical Protein, at 631655 to 633710
9566
mRNA_1199: 9567 - K02325 POLE2 DNA polymerase epsilon subunit 2, at 634120 to 636519
9567
mRNA_1200: 9568 - KOG3132 m3G-cap-specific nuclear import receptor (Snurportin1), at 636732 to 638216
9568
mRNA_1201: 9569 - K12625 LSM6 U6 snRNA-associated Sm-like protein LSm6, at 638418 to 638898
9569
mRNA_1202: 9570 - K11253 H3 histone H3, at 640154 to 640968
9570
Group
Condition
mRNA_1198
mRNA_1199
mRNA_1200
mRNA_1201
mRNA_1202
9566
9567
9568
9569
9570
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-1.1
-1.8
ypd buoyancy
40 hrs High Buoyancy
0.5
-0.3
-1.5
growth on ypd
YPD
-0.6
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.0
-0.7
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.6
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.3
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
-0.9
growth on oleic acid
YNB Oleic Acid
-0.1
-0.0
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.7
-0.5
growth on oleic acid
YNB Glucose
-0.1
0.2
0.2
auxotrophy
Dropout Complete
0.5
0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
0.7
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.0
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.3
0.1
growth on ricinoleic acid
YNB Glucose
0.1
0.8
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.1
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.2
0.8
auxotrophy
YNB Glucose
0.5
0.1
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.0
0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.0
1.2
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