Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1167: 9535 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 557587 to 560660 9535 mRNA_1168: 9536 - K01474 hyuB N-methylhydantoinase B, at 560884 to 563023 9536 mRNA_1169: 9537 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 563547 to 566148 9537 mRNA_1170: 9538 - K09531 DNAJC11 DnaJ homolog subfamily C member 11, at 566177 to 568431 9538 mRNA_1171: 9539 - K07277 SAM50, TOB55, bamA outer membrane protein insertion porin family, at 568552 to 570961 9539
Group Condition mRNA_1167 mRNA_1168 mRNA_1169 mRNA_1170 mRNA_1171
9535
9536
9537
9538
9539
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 0.3 -0.5 -0.9  
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.7 0.0 -1.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 -0.1 -0.6  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.0 -0.0 -0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 0.1 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.1 -0.2 0.2  
growth on ricinoleic acid YNB Glucose 0.0 -0.2 0.1 -0.4  
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -0.3 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.5 -0.4 -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 -0.1 -0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.1 -0.3 -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.2 0.0 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.3 0.1 -0.3  
growth on oleic acid YNB Glucose 0.2 0.4 -0.3 -0.2  
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.3 -0.1 -0.4  
growth on oleic acid YNB Oleic Acid 0.2 0.2 -0.2 0.0  
auxotrophy YNB Glucose 75mM Methionine 0.2 0.2 -0.1 0.1  
auxotrophy YNB Glucose 75mM Arginine 0.3 0.6 -0.2 0.2  
auxotrophy YNB Glucose 0.3 0.6 -0.2 0.4  
auxotrophy Dropout Complete 0.5 0.3 -0.1 0.5  
growth on ypd YPD 0.3 0.7 -0.1 0.3  
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