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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1166: 9534 - KOG2533 Permease of the major facilitator superfamily, at 554788 to 557060
9534
mRNA_1167: 9535 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 557587 to 560660
9535
mRNA_1168: 9536 - K01474 hyuB N-methylhydantoinase B, at 560884 to 563023
9536
mRNA_1169: 9537 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 563547 to 566148
9537
mRNA_1170: 9538 - K09531 DNAJC11 DnaJ homolog subfamily C member 11, at 566177 to 568431
9538
Group
Condition
mRNA_1166
mRNA_1167
mRNA_1168
mRNA_1169
mRNA_1170
9534
9535
9536
9537
9538
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.5
0.3
-0.5
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.4
-0.1
-0.2
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.4
0.7
0.0
-1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
-0.1
0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.3
0.0
-0.2
0.1
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.0
-0.0
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.1
0.1
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.2
0.0
-0.0
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.2
0.5
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.1
0.1
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
0.2
0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.4
0.2
0.2
-0.2
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.3
0.1
-0.3
-0.2
growth on oleic acid
YNB Glucose
-0.1
0.2
0.4
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.2
0.2
-0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.0
0.3
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.4
0.3
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.3
0.6
-0.2
0.2
auxotrophy
YNB Glucose
-0.2
0.3
0.6
-0.2
0.4
auxotrophy
Dropout Complete
-0.3
0.5
0.3
-0.1
0.5
growth on ypd
YPD
0.1
0.3
0.7
-0.1
0.3
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