Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549366 to 551873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552710 to 552960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553391 to 554372 9533 mRNA_1166: 9534 - KOG2533 Permease of the major facilitator superfamily, at 554788 to 557060 9534 mRNA_1167: 9535 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 557587 to 560660 9535
Group Condition mRNA_1163 mRNA_1164 mRNA_1165 mRNA_1166 mRNA_1167
9531
9532
9533
9534
9535
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 0.2 -1.4 -0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.0 -0.1 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.0 0.0 -0.0 -0.4
growth on ricinoleic acid YNB Glucose -0.1 0.1 -0.1 -0.3 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.3 -0.0 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.4 0.1 -0.0 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.3 0.2 0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 0.1 -0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 0.4 -0.1 -0.3 -0.0
auxotrophy YNB Glucose 0.1 -0.0 0.0 -0.2 0.3
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 0.1 -0.4 0.3
growth on oleic acid YNB Oleic Acid -0.1 0.0 0.5 -0.4 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.2 0.3 0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.6 -0.1 0.1 -0.0
growth on ypd YPD -0.0 0.2 0.1 0.1 0.3
growth on oleic acid YNB Glucose -0.0 0.0 0.5 -0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.5 0.2 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 0.3 0.0 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.5 0.2 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.3 0.2 0.0 0.4
auxotrophy Dropout Complete 0.3 0.2 0.4 -0.3 0.5
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