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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1159: 9527 - HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540, at 538557 to 540883
9527
mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540916 to 543538
9528
mRNA_1161: 9529 - K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1, at 543983 to 547395
9529
mRNA_1162: 9530 - SUPERFAMILY--SSF52047, at 547799 to 548923
9530
mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549366 to 551873
9531
Group
Condition
mRNA_1159
mRNA_1160
mRNA_1161
mRNA_1162
mRNA_1163
9527
9528
9529
9530
9531
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-1.2
-0.7
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.0
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.5
0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.4
0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.0
-0.0
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
-0.0
-0.1
growth on ypd
YPD
0.0
-0.1
-0.1
-0.0
growth on oleic acid
YNB Glucose
0.1
-0.4
0.1
-0.0
growth on oleic acid
YNB Oleic Acid
0.0
-0.1
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.8
0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.4
0.2
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose
0.2
-0.4
0.3
0.1
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.3
-0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.1
0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.7
-0.4
-0.0
auxotrophy
Dropout Complete
0.3
-0.2
0.3
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.6
0.1
0.1
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