Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1157: 9525 - K14818 SQT1 ribosome assembly protein SQT1, at 531850 to 533484 9525 mRNA_1158: 9526 - Hypothetical Protein, at 533999 to 537881 9526 mRNA_1159: 9527 - HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540, at 538557 to 540883 9527 mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540916 to 543538 9528 mRNA_1161: 9529 - K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1, at 543983 to 547395 9529
Group Condition mRNA_1157 mRNA_1158 mRNA_1159 mRNA_1160 mRNA_1161
9525
9526
9527
9528
9529
facs on lipid accumulation Sorted High BODIPY Gate   0.5 -0.3 -1.0  
ypd buoyancy 40 hrs No Buoyancy Separation   0.3 0.1 -1.2  
growth on ricinoleic acid YNB Ricinoleic Acid   0.0 -0.2 -0.5  
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 -0.1 -0.2  
auxotrophy YNB Glucose 75mM Arginine   0.1 -0.0 -0.4  
auxotrophy YNB Glucose 75mM Methionine   0.3 0.2 -0.8  
growth on oleic acid YNB Glucose   0.0 0.1 -0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 0.0 -0.4  
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.1 -0.2  
ypd buoyancy 40 hrs High Buoyancy   0.2 -0.4 0.0  
ypd buoyancy 40 hrs Median Buoyancy   0.0 -0.1 -0.0  
auxotrophy YNB Glucose   0.2 0.2 -0.4  
auxotrophy Dropout Complete   -0.0 0.3 -0.2  
growth on ypd YPD   0.2 0.0 -0.1  
growth on oleic acid YNB Oleic Acid   0.2 0.0 -0.1  
growth on ricinoleic acid YNB Glucose   0.1 0.2 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0 0.4 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2 0.2 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate   0.5 0.1 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.0 0.4 0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 0.2 0.7  
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