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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1156: 9524 - Hypothetical Protein, at 530031 to 531445
9524
mRNA_1157: 9525 - K14818 SQT1 ribosome assembly protein SQT1, at 531850 to 533484
9525
mRNA_1158: 9526 - Hypothetical Protein, at 533999 to 537881
9526
mRNA_1159: 9527 - HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540, at 538557 to 540883
9527
mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540916 to 543538
9528
Group
Condition
mRNA_1156
mRNA_1157
mRNA_1158
mRNA_1159
mRNA_1160
9524
9525
9526
9527
9528
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.3
0.1
-1.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.5
-0.3
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.0
-0.2
-0.5
growth on oleic acid
YNB Glucose
-0.0
0.0
0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.0
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.1
0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.0
0.2
-0.4
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.1
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.3
0.2
-0.8
auxotrophy
Dropout Complete
0.1
-0.0
0.3
-0.2
growth on oleic acid
YNB Oleic Acid
0.1
0.2
0.0
-0.1
growth on ypd
YPD
0.2
0.2
0.0
-0.1
growth on ricinoleic acid
YNB Glucose
0.1
0.1
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.0
0.4
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.5
0.1
0.1
auxotrophy
YNB Glucose
0.6
0.2
0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.0
0.4
0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
0.2
0.7
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