Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1143: 9511 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 505667 to 510461 9511 mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510566 to 511961 9512 mRNA_1145: 9513 - K00669 AANAT arylalkylamine N-acetyltransferase, at 512734 to 513942 9513 mRNA_1146: 9514 - K06682 TEM1 Gtp-binding protein of the ras superfamily involved in termination of M-phase, at 514392 to 515549 9514 mRNA_1147: 9515 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 515844 to 517256 9515
Group Condition mRNA_1143 mRNA_1144 mRNA_1145 mRNA_1146 mRNA_1147
9511
9512
9513
9514
9515
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.9 -0.3 -0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.3 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.0 -0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.5 -0.4 -0.0 -0.6
growth on oleic acid YNB Glucose -0.2 -0.1 0.3 -0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.0 -0.5 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.5 -0.2 -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 0.3 -0.3 0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.2 0.3 -0.1
growth on ricinoleic acid YNB Glucose 0.0 0.4 -0.3 -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 -0.3 -0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1 -0.8 0.5 0.3
growth on ypd YPD -0.1 -0.0 0.0 0.6 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.6 0.0 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 0.5 -0.2 0.1
auxotrophy YNB Glucose -0.0 -0.2 0.2 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.5 0.1 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.3 0.1 -0.2 0.4
auxotrophy Dropout Complete -0.2 -0.2 0.8 -0.1 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.6 0.5 0.3 -0.2
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