Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1142: 9510 - K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta, at 503587 to 505304 9510 mRNA_1143: 9511 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 505667 to 510461 9511 mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510566 to 511961 9512 mRNA_1145: 9513 - K00669 AANAT arylalkylamine N-acetyltransferase, at 512734 to 513942 9513 mRNA_1146: 9514 - K06682 TEM1 Gtp-binding protein of the ras superfamily involved in termination of M-phase, at 514392 to 515549 9514
Group Condition mRNA_1142 mRNA_1143 mRNA_1144 mRNA_1145 mRNA_1146
9510
9511
9512
9513
9514
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0 -0.9 -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -0.2 -0.3 -0.0
growth on oleic acid YNB Oleic Acid   -0.3 -0.2 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine   -0.1 -0.4 0.3 -0.3
growth on oleic acid YNB Glucose   -0.2 -0.1 0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate   -0.0 0.0 -0.5 0.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 -0.1 -0.8 0.5
ypd buoyancy 40 hrs Median Buoyancy   -0.1 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose   0.0 0.4 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate   -0.1 0.2 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy   -0.1 -0.1 -0.2 0.3
auxotrophy YNB Glucose   -0.0 -0.2 0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 0.3 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.1 0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.0 0.5 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 0.5 -0.2 -0.2
auxotrophy Dropout Complete   -0.2 -0.2 0.8 -0.1
growth on ypd YPD   -0.1 -0.0 0.0 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0 0.5 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 0.6 0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid   0.0 0.6 0.5 0.3
remove
mRNA_1142
plot		 remove
mRNA_1143
plot		 remove
mRNA_1144		 remove
mRNA_1145
plot		 remove
mRNA_1146
plot