Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1140: 9508 - Hypothetical Protein, at 501144 to 502364 9508 mRNA_1141: 9509 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 502606 to 503454 9509 mRNA_1142: 9510 - K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta, at 503587 to 505304 9510 mRNA_1143: 9511 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 505667 to 510461 9511 mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510566 to 511961 9512
Group Condition mRNA_1140 mRNA_1141 mRNA_1142 mRNA_1143 mRNA_1144
9508
9509
9510
9511
9512
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.3   -0.0 -0.9
auxotrophy YNB Glucose 75mM Methionine 0.1 -1.2   -0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.8   0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 -1.0   -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.3   -0.3 -0.2
growth on oleic acid YNB Glucose -0.1 -0.4   -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2   -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5   -0.1 -0.1
auxotrophy Dropout Complete 0.3 -0.4   -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1   -0.1 -0.1
auxotrophy YNB Glucose 0.4 -0.3   -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2   -0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.6   0.0 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.2   0.1 0.5
growth on ricinoleic acid YNB Glucose 0.1 0.2   0.0 0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.8   -0.0 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.7   -0.1 0.2
growth on ypd YPD 0.2 0.8   -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.5   0.0 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.9   -0.0 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.7   0.1 0.6
remove
mRNA_1140
plot
remove
mRNA_1141
plot
remove
mRNA_1142
remove
mRNA_1143
plot
remove
mRNA_1144
plot