Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1126: 9494 - K15334 NCL1, TRM4 multisite-specific tRNA-(cytosine-C5)-methyltransferase, at 463118 to 466210 9494 mRNA_1127: 9495 - K00143 LYS2 L-aminoadipate-semialdehyde dehydrogenase, at 466494 to 471179 9495 mRNA_1128: 9496 - Interpro Arrestin (or S-antigen), N-terminal domain 0, at 471353 to 475855 9496 mRNA_1129: 9497 - K12391 AP1G1 AP-1 complex subunit gamma-1, at 476023 to 479289 9497 mRNA_1130: 9498 - KOG1773 Stress responsive protein, at 479991 to 480650 9498
Group Condition mRNA_1126 mRNA_1127 mRNA_1128 mRNA_1129 mRNA_1130
9494
9495
9496
9497
9498
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.4 -0.1 -2.6 -2.1
facs on lipid accumulation Sorted High BODIPY Gate -1.9 -1.6 -0.1 -1.4 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -1.7 0.1 -0.4 -1.8
facs on lipid accumulation Sorted No BODIPY Gate -1.1 -1.0 -0.1 -0.6 -0.7
auxotrophy YNB Glucose 75mM Arginine 0.2 -1.5 -0.1 0.5 -0.2
growth on ypd YPD -0.2 0.0 -0.1 0.5 -1.4
growth on oleic acid YNB Glucose -0.1 -1.2 0.1 -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine 0.6 -1.7 -0.1 0.6 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.1 0.1 0.2 -1.0
growth on oleic acid YNB Oleic Acid 0.4 -1.3 0.0 0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.6 0.2 0.2 -0.3
growth on ricinoleic acid YNB Glucose 0.7 -2.1 -0.1 0.3 0.8
auxotrophy YNB Glucose 0.7 -1.6 -0.0 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 1.1 -1.7 -0.0 1.0 -0.6
auxotrophy Dropout Complete 0.1 -1.3 0.1 0.6 0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -1.5 -0.1 -0.0 2.8
ypd buoyancy 40 hrs Low Buoyancy 0.4 -0.1 0.1 0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -1.4 -0.1 0.2 3.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.8 -1.3 0.2 1.6 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -1.6 0.0 0.3 3.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.2 0.0 0.6 3.6
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