Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1123: 9491 - K00078 DHDH dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP), at 456532 to 457918 9491 mRNA_1124: 9492 - K09613 COPS5, CSN5 COP9 signalosome complex subunit 5, at 458374 to 459990 9492 mRNA_1125: 9493 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 460316 to 462771 9493 mRNA_1126: 9494 - K15334 NCL1, TRM4 multisite-specific tRNA-(cytosine-C5)-methyltransferase, at 463118 to 466210 9494 mRNA_1127: 9495 - K00143 LYS2 L-aminoadipate-semialdehyde dehydrogenase, at 466494 to 471179 9495
Group Condition mRNA_1123 mRNA_1124 mRNA_1125 mRNA_1126 mRNA_1127
9491
9492
9493
9494
9495
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -1.0 -0.5 -1.9 -1.6
facs on lipid accumulation Sorted No BODIPY Gate 0.5 -1.0 -0.1 -1.1 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.2 -0.7 -0.3 -1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.0 -0.3 -0.4 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.0 -0.3 -0.5 -1.5
growth on oleic acid YNB Oleic Acid -0.6 -0.5 -0.1 0.4 -1.3
growth on oleic acid YNB Glucose -0.3 -0.2 -0.3 -0.1 -1.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -1.2 0.3 0.5 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 0.3 -0.2 -0.7 -1.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.7 -0.2 -0.2 -1.6
growth on ricinoleic acid YNB Glucose 0.0 -0.0 -0.1 0.7 -2.1
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.5 0.2 0.6 -1.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.5 -0.2 1.1 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.7 -0.2 0.8 -1.3
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.3 0.2 0.2 -1.5
auxotrophy YNB Glucose -0.2 -0.3 0.2 0.7 -1.6
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.4 -0.0 0.1 -0.6
auxotrophy Dropout Complete 0.0 0.1 0.2 0.1 -1.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.6 0.4 -0.3 0.1
growth on ypd YPD -0.0 -0.2 0.4 -0.2 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 0.2 0.4 -0.1
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