Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1121: 9489 - K05389 KCNKF potassium channel subfamily K, other eukaryote, at 450183 to 453173 9489 mRNA_1122: 9490 - BLAST glycoside hydrolase family 28 protein [Tulasnella cal..., at 453460 to 456260 9490 mRNA_1123: 9491 - K00078 DHDH dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP), at 456532 to 457918 9491 mRNA_1124: 9492 - K09613 COPS5, CSN5 COP9 signalosome complex subunit 5, at 458374 to 459990 9492 mRNA_1125: 9493 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 460316 to 462771 9493
Group Condition mRNA_1121 mRNA_1122 mRNA_1123 mRNA_1124 mRNA_1125
9489
9490
9491
9492
9493
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.3 -0.9 -1.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -1.4 0.1 -1.0 -0.5
growth on oleic acid YNB Oleic Acid -0.2 -0.6 -0.6 -0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.1 -0.0 -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.0 -0.2 -0.6 0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.2 -0.1 -0.5 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 0.5 -1.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.1 -0.4 0.2 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 -0.2 -0.1 0.2
growth on ricinoleic acid YNB Glucose -0.4 -0.1 0.0 -0.0 -0.1
growth on oleic acid YNB Glucose 0.1 0.2 -0.3 -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.3 0.0 -0.7 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.2 0.0 0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.3 -0.2 0.0 -0.3
growth on ypd YPD -0.1 -0.1 -0.0 -0.2 0.4
auxotrophy YNB Glucose 0.1 0.3 -0.2 -0.3 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.4 0.0 -0.5 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.2 -0.4 0.7 -0.2
auxotrophy Dropout Complete -0.1 0.4 0.0 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 0.4 0.3 -0.3 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 1.0 0.6 0.3 -0.2
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