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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1115: 9483 - SUPERFAMILY--SSF52047, at 439344 to 441081
9483
mRNA_1116: 9484 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 441335 to 443528
9484
mRNA_1117: 9485 - K13102 KIN DNA/RNA-binding protein KIN17, at 443661 to 444962
9485
mRNA_1118: 9486 - HMMPfam-RTA1 like protein-PF04479, at 445419 to 446946
9486
mRNA_1119: 9487 - Hypothetical Protein, at 447624 to 448229
9487
Group
Condition
mRNA_1115
mRNA_1116
mRNA_1117
mRNA_1118
mRNA_1119
9483
9484
9485
9486
9487
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.2
-1.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.2
-1.4
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
-0.5
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
-0.3
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.2
-0.4
-0.6
growth on oleic acid
YNB Glucose
-0.2
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-0.3
0.0
auxotrophy
YNB Glucose
0.1
0.1
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.2
0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.2
0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.3
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.1
0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.1
0.3
0.1
growth on ricinoleic acid
YNB Glucose
0.3
0.0
0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.3
0.1
-0.0
auxotrophy
Dropout Complete
0.2
0.2
0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
0.5
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
0.9
-0.1
growth on ypd
YPD
-0.1
0.3
1.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
1.0
0.4
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