Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1111: 9479 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 430146 to 432940 9479 mRNA_1112: 9480 - Interpro Protein of unknown function (DUF3602) Protein of unknown function (DUF3602) 0, at 433263 to 434310 9480 mRNA_1113: 9481 - HMMPfam-Protein of unknown function (DUF3602)-PF12223, at 434481 to 435131 9481 mRNA_1114: 9482 - KOG1396 Uncharacterized conserved protein, at 435382 to 439006 9482 mRNA_1115: 9483 - SUPERFAMILY--SSF52047, at 439344 to 441081 9483
Group Condition mRNA_1111 mRNA_1112 mRNA_1113 mRNA_1114 mRNA_1115
9479
9480
9481
9482
9483
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.1 -1.4 0.3 0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2 -0.6 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 -0.0 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.7 0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.3 -0.8 -0.2 0.2
growth on ypd YPD -0.4 -0.1 -0.0 0.3 -0.1
growth on oleic acid YNB Glucose -0.2 -0.1 -0.2 0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3 -0.2 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 -0.1 -0.1 0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 0.4 -0.2 -0.1
auxotrophy Dropout Complete -0.1 -0.1 -0.2 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.2 -0.6 0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2 -0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 0.0 0.3 -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.2 0.2 -0.2 0.2
auxotrophy YNB Glucose 0.1 0.0 0.1 -0.1 0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.3 0.1 0.3 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.4 -0.0 0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.2 -0.5 0.6 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.4 0.4 0.4 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.4 0.3 0.7 0.2
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