Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1108: 9476 - KOG1134 Uncharacterized conserved protein, at 422767 to 426748 9476 mRNA_1109: 9477 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 426954 to 427895 9477 mRNA_1110: 9478 - Hypothetical Protein, at 428517 to 429913 9478 mRNA_1111: 9479 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 430146 to 432940 9479 mRNA_1112: 9480 - Interpro Protein of unknown function (DUF3602) Protein of unknown function (DUF3602) 0, at 433263 to 434310 9480
Group Condition mRNA_1108 mRNA_1109 mRNA_1110 mRNA_1111 mRNA_1112
9476
9477
9478
9479
9480
auxotrophy Dropout Complete -0.9 -0.3 -0.2 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -1.0 -0.1 -0.2 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.3 -0.2 -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.2 -0.1 0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.8 -0.2 -0.1 -0.2 0.0
growth on ypd YPD -0.6 0.3 -0.4 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 0.0 -0.1 0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.4 0.4 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.3 0.2 -0.1 -0.1
growth on oleic acid YNB Glucose -0.8 0.1 -0.0 -0.2 -0.1
auxotrophy YNB Glucose -0.6 -0.1 -0.1 0.1 0.0
growth on oleic acid YNB Oleic Acid -0.4 0.1 -0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 0.2 -0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.1 0.6 -0.4 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 0.1 -0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 0.1 0.2 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 0.3 -0.3 0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 0.1 0.2 -0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2 0.2 -0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.3 0.1 -0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.0 0.3 0.1 0.4
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