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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1099: 9467 - K08515 VAMP7 vesicle-associated membrane protein 7, at 401360 to 402298
9467
mRNA_1100: 9468 - K14679 TRL1 tRNA ligase, at 402585 to 405523
9468
mRNA_1101: 9469 - KOG1206 Peroxisomal multifunctional beta-oxidation protein and related enzymes, at 405793 to 407272
9469
mRNA_1102: 9470 - K03327 TC.MATE, SLC47A, norM, mdtK, dinF multidrug resistance protein, MATE family, at 407441 to 409508
9470
mRNA_1103: 9471 - KOG0252 Inorganic phosphate transporter, at 410090 to 412457
9471
Group
Condition
mRNA_1099
mRNA_1100
mRNA_1101
mRNA_1102
mRNA_1103
9467
9468
9469
9470
9471
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.3
-1.0
-1.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.8
-0.2
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.3
0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.2
-0.3
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
-0.6
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.0
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.1
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.4
0.5
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.3
0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.4
0.8
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.2
0.4
-0.1
growth on oleic acid
YNB Oleic Acid
0.0
0.0
0.4
0.1
auxotrophy
YNB Glucose
0.3
0.0
0.4
-0.1
growth on ricinoleic acid
YNB Glucose
0.6
-0.2
0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.1
-0.1
0.5
auxotrophy
Dropout Complete
0.5
-0.1
0.7
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.9
0.2
0.3
-0.4
growth on ypd
YPD
0.5
0.1
0.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.8
-0.1
0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
0.1
0.4
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.2
0.6
0.8
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