Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397231 to 398090 9464 mRNA_1097: 9465 - Hypothetical Protein, at 399144 to 399987 9465 mRNA_1098: 9466 - Hypothetical Protein, at 400435 to 400998 9466 mRNA_1099: 9467 - K08515 VAMP7 vesicle-associated membrane protein 7, at 401360 to 402298 9467 mRNA_1100: 9468 - K14679 TRL1 tRNA ligase, at 402585 to 405523 9468
Group Condition mRNA_1096 mRNA_1097 mRNA_1098 mRNA_1099 mRNA_1100
9464
9465
9466
9467
9468
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 -0.3 -0.2 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 0.1 -0.2 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.7 -0.3 0.2  
growth on oleic acid YNB Glucose -1.1 -0.1 0.6 -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.2 0.2 -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.4 -0.5 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 0.4 -0.0  
growth on oleic acid YNB Oleic Acid -0.2 -0.1 0.2 0.0  
facs on lipid accumulation Sorted No BODIPY Gate 0.7 -0.5 0.1 -0.2  
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.2 -0.1 0.1  
growth on ypd YPD 0.3 -0.4 -0.1 0.5  
ypd buoyancy 40 hrs Median Buoyancy 0.9 -0.2 -0.5 0.2  
auxotrophy Dropout Complete -0.3 0.3 0.1 0.5  
auxotrophy YNB Glucose 75mM Methionine -0.3 0.1 0.5 0.3  
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 0.4 0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2 0.2 0.5  
auxotrophy YNB Glucose 0.3 0.1 0.4 0.3  
growth on ricinoleic acid YNB Glucose 0.4 -0.5 0.7 0.6  
ypd buoyancy 40 hrs Low Buoyancy 1.0 -0.2 -0.4 0.9  
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -0.3 0.5 0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 0.0 0.4 0.8  
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