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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397231 to 398090
9464
mRNA_1097: 9465 - Hypothetical Protein, at 399144 to 399987
9465
mRNA_1098: 9466 - Hypothetical Protein, at 400435 to 400998
9466
mRNA_1099: 9467 - K08515 VAMP7 vesicle-associated membrane protein 7, at 401360 to 402298
9467
mRNA_1100: 9468 - K14679 TRL1 tRNA ligase, at 402585 to 405523
9468
Group
Condition
mRNA_1096
mRNA_1097
mRNA_1098
mRNA_1099
mRNA_1100
9464
9465
9466
9467
9468
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.0
-0.3
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
0.1
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.7
-0.3
0.2
growth on oleic acid
YNB Glucose
-1.1
-0.1
0.6
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.2
0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.8
-0.4
-0.5
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.0
0.4
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
0.2
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.7
-0.5
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.2
-0.1
0.1
growth on ypd
YPD
0.3
-0.4
-0.1
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.9
-0.2
-0.5
0.2
auxotrophy
Dropout Complete
-0.3
0.3
0.1
0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.1
0.5
0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.1
0.4
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.2
0.2
0.5
auxotrophy
YNB Glucose
0.3
0.1
0.4
0.3
growth on ricinoleic acid
YNB Glucose
0.4
-0.5
0.7
0.6
ypd buoyancy
40 hrs Low Buoyancy
1.0
-0.2
-0.4
0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
-0.3
0.5
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
0.0
0.4
0.8
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