Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1092: 9460 - SUPERFAMILY--SSF52833, at 388491 to 389761 9460 mRNA_1093: 9461 - K08734 MLH1 DNA mismatch repair protein MLH1, at 389832 to 392680 9461 mRNA_1094: 9462 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 393718 to 395326 9462 mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395816 to 397150 9463 mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397231 to 398090 9464
Group Condition mRNA_1092 mRNA_1093 mRNA_1094 mRNA_1095 mRNA_1096
9460
9461
9462
9463
9464
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 -0.1 -0.7 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.2 -0.4 0.0 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 -0.3 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.0 -0.3 -0.3 -0.3
growth on oleic acid YNB Glucose -0.3 -0.2 -0.2 0.7 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -0.2 -0.6 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.0 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.2 0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1 -0.5 0.6 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.0 -0.5 -0.0 0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 0.2 -0.7 0.7
auxotrophy Dropout Complete -0.0 0.1 -0.1 0.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.1 0.2 -0.2 -0.2
growth on ypd YPD -0.1 0.0 -0.2 0.5 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.0 -0.6 0.2 0.5
growth on ricinoleic acid YNB Glucose 0.3 0.0 -0.3 0.1 0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 0.6 0.4
auxotrophy YNB Glucose 0.0 -0.0 -0.0 0.6 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.0 -0.1 0.5 0.6
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.0 0.2 0.3 0.9
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.2 0.8 1.0
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