Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1088: 9456 - KOG3179 Predicted glutamine synthetase, at 380129 to 381362 9456 mRNA_1089: 9457 - K01638 aceB, glcB malate synthase, at 381522 to 383960 9457 mRNA_1090: 9458 - K12393 AP1M AP-1 complex subunit mu, at 384249 to 386320 9458 mRNA_1091: 9459 - Hypothetical Protein, at 386691 to 388371 9459 mRNA_1092: 9460 - SUPERFAMILY--SSF52833, at 388491 to 389761 9460
Group Condition mRNA_1088 mRNA_1089 mRNA_1090 mRNA_1091 mRNA_1092
9456
9457
9458
9459
9460
growth on oleic acid YNB Oleic Acid -0.5 -2.9   0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -3.0   0.4 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -2.6   0.3 0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 0.1   -0.3 -0.1
growth on oleic acid YNB Glucose 0.1 -0.4   0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2   0.4 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1   0.0 -0.1
growth on ypd YPD 0.2 -0.2   0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.4   -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.2   -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1   0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.1   -0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.0   -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.2   0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.3   -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2   0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 -0.0   -0.4 0.1
auxotrophy YNB Glucose 0.3 -0.1   0.4 0.0
auxotrophy Dropout Complete 0.5 -0.1   0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.1 0.0   0.5 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.7 0.2   0.4 -0.1
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