Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1072: 9440 - Hypothetical Protein, at 341677 to 343060 9440 mRNA_1073: 9441 - Hypothetical Protein, at 343845 to 345302 9441 mRNA_1074: 9442 - HMMPfam-Ankyrin repeats (3 copies)-PF12796,ProSiteProfiles-Ankyrin repeat profile.-PS50088,ProSiteProfiles-Ankyrin repeat region circular profile.-PS50297,SUPERFAMILY--SSF48403, at 346068 to 346985 9442 mRNA_1075: 9443 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 347170 to 348411 9443 mRNA_1076: 9444 - K02324 POLE1 DNA polymerase epsilon subunit 1, at 348660 to 356355 9444
Group Condition mRNA_1072 mRNA_1073 mRNA_1074 mRNA_1075 mRNA_1076
9440
9441
9442
9443
9444
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.6 -0.0 -0.1  
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.4 -0.2 0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.5 -0.3 0.0  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.1 -0.3  
growth on ypd YPD -0.4 0.4 -0.5 -0.1  
growth on oleic acid YNB Glucose 0.2 -0.1 -0.4 -0.2  
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 0.0 0.0  
auxotrophy Dropout Complete 0.6 -1.0 -0.1 0.1  
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.6 0.0 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 0.1 -0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 0.0 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 -0.4 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.4 -1.1 0.3  
growth on oleic acid YNB Oleic Acid 0.1 0.1 -0.3 -0.0  
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.5 0.2 -0.2  
auxotrophy YNB Glucose 0.4 -0.6 0.2 0.0  
growth on ricinoleic acid YNB Glucose 0.3 0.2 -0.7 0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.7 0.6 0.3  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 0.0 0.4  
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.5 0.3 0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.3 0.5 0.1  
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