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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1067: 9435 - K01580 E4.1.1.15, gadB, gadA, GAD glutamate decarboxylase, at 323098 to 325825
9435
mRNA_1068: 9436 - Hypothetical Protein, at 325989 to 327863
9436
mRNA_1069: 9437 - K11267 PDS5 sister chromatid cohesion protein PDS5, at 327960 to 333301
9437
mRNA_1070: 9438 - K20792 NAA15_16 N-alpha-acetyltransferase 15/16, NatA auxiliary subunit, at 333722 to 337577
9438
mRNA_1071: 9439 - K18757 LARP1 la-related protein 1, at 337866 to 340861
9439
Group
Condition
mRNA_1067
mRNA_1068
mRNA_1069
mRNA_1070
mRNA_1071
9435
9436
9437
9438
9439
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.4
0.4
-2.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
0.1
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
0.2
-1.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
0.1
-0.7
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.6
0.0
-0.3
auxotrophy
Dropout Complete
-0.5
0.0
-0.2
auxotrophy
YNB Glucose
-0.3
0.1
-0.3
growth on oleic acid
YNB Oleic Acid
-0.4
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.7
0.4
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
0.1
growth on oleic acid
YNB Glucose
-0.4
-0.0
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.2
-0.1
growth on ypd
YPD
0.1
-0.3
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.0
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.3
-0.1
0.4
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