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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1065: 9433 - Hypothetical Protein, at 318251 to 319455
9433
mRNA_1066: 9434 - KOG1383 Glutamate decarboxylase/sphingosine phosphate lyase, at 320131 to 322252
9434
mRNA_1067: 9435 - K01580 E4.1.1.15, gadB, gadA, GAD glutamate decarboxylase, at 323098 to 325825
9435
mRNA_1068: 9436 - Hypothetical Protein, at 325989 to 327863
9436
mRNA_1069: 9437 - K11267 PDS5 sister chromatid cohesion protein PDS5, at 327960 to 333301
9437
Group
Condition
mRNA_1065
mRNA_1066
mRNA_1067
mRNA_1068
mRNA_1069
9433
9434
9435
9436
9437
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
-0.0
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.0
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
0.2
-0.4
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.1
-0.6
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.1
-0.5
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.1
-0.7
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.1
-0.0
-0.1
growth on oleic acid
YNB Glucose
-0.3
0.1
-0.4
-0.0
auxotrophy
Dropout Complete
-0.3
0.4
-0.5
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.3
-1.4
0.4
auxotrophy
YNB Glucose
-0.5
0.4
-0.3
0.1
growth on ypd
YPD
-0.0
-0.1
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.0
-0.6
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
-0.1
-0.8
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.1
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.5
-0.7
0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.3
-0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.1
0.4
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.8
-0.2
0.2
-0.0
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