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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1060: 9428 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 301806 to 307768
9428
mRNA_1061: 9429 - BLAST heat shock 70 kDa protein 12A [Rhizoctonia solani AG-..., at 308503 to 311284
9429
mRNA_1062: 9430 - K10742 DNA2 DNA replication ATP-dependent helicase Dna2, at 311379 to 314968
9430
mRNA_1063: 9431 - BLAST DNA replication ATP-dependent helicase Dna2 [Rhod..., at 315591 to 316093
9431
mRNA_1064: 9432 - K05533 ANP1 mannan polymerase II complex ANP1 subunit, at 316506 to 317869
9432
Group
Condition
mRNA_1060
mRNA_1061
mRNA_1062
mRNA_1063
mRNA_1064
9428
9429
9430
9431
9432
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.0
-0.5
-0.6
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.3
-0.2
0.2
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.2
-0.9
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.8
-0.3
0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.3
-0.2
-0.5
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.0
-0.1
-0.8
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.4
-0.2
0.1
-0.1
growth on oleic acid
YNB Glucose
-0.0
-0.5
0.1
-0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
-0.1
-0.6
0.3
auxotrophy
Dropout Complete
0.3
0.2
-0.2
-0.7
0.1
growth on ricinoleic acid
YNB Glucose
0.2
0.0
-0.1
-0.7
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.5
-0.1
0.3
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.3
-0.2
0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.0
0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.3
0.2
-0.4
0.4
auxotrophy
YNB Glucose
0.4
0.1
-0.1
-0.6
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.2
-0.1
-0.2
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.3
-0.1
-1.0
1.0
growth on ypd
YPD
0.1
-0.0
-0.3
0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.2
-0.0
-0.5
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.1
-0.0
-0.9
1.0
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