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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1051: 9419 - SUPERFAMILY--SSF54928, at 277584 to 281665
9419
mRNA_1052: 9420 - K10896 FANCM fanconi anemia group M protein, at 282030 to 286830
9420
mRNA_1053: 9421 - KOG3856 Uncharacterized conserved protein, at 287075 to 287902
9421
mRNA_1054: 9422 - K09419 HSFF heat shock transcription factor, other eukaryote, at 288015 to 290756
9422
mRNA_1055: 9423 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 292025 to 293259
9423
Group
Condition
mRNA_1051
mRNA_1052
mRNA_1053
mRNA_1054
mRNA_1055
9419
9420
9421
9422
9423
growth on ypd
YPD
-0.3
-0.3
-0.9
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
-0.9
growth on oleic acid
YNB Glucose
-0.2
-0.2
-0.4
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.4
-0.9
auxotrophy
YNB Glucose
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.1
0.9
auxotrophy
Dropout Complete
-0.1
0.0
0.8
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