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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1048: 9416 - KOG1812 Predicted E3 ubiquitin ligase, at 272884 to 273999
9416
mRNA_1049: 9417 - K12878 THOC1 THO complex subunit 1, at 274076 to 276723
9417
mRNA_1050: 9418 - Hypothetical Protein, at 277002 to 277499
9418
mRNA_1051: 9419 - SUPERFAMILY--SSF54928, at 277584 to 281665
9419
mRNA_1052: 9420 - K10896 FANCM fanconi anemia group M protein, at 282030 to 286830
9420
Group
Condition
mRNA_1048
mRNA_1049
mRNA_1050
mRNA_1051
mRNA_1052
9416
9417
9418
9419
9420
growth on oleic acid
YNB Oleic Acid
0.0
-0.4
-0.2
-0.1
-0.2
growth on ypd
YPD
-0.1
0.0
-0.2
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.2
-0.6
0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.1
-0.3
-0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.2
0.2
-0.2
-0.2
auxotrophy
Dropout Complete
-0.1
0.3
-0.2
-0.1
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.4
-0.2
-0.0
-0.0
growth on oleic acid
YNB Glucose
0.0
0.0
0.3
-0.2
-0.2
auxotrophy
YNB Glucose
0.0
0.3
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.0
0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.1
0.4
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.1
0.1
0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.2
-0.3
0.0
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.2
-0.4
0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.1
0.1
-0.0
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-0.0
0.4
0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
-0.1
0.2
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
0.5
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.3
0.3
0.1
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
0.5
-0.2
0.1
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
0.4
-0.1
0.2
0.2
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