Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1045: 9413 - Hypothetical Protein, at 268181 to 268879 9413 mRNA_1046: 9414 - K11346 ING4 inhibitor of growth protein 4, at 270342 to 271774 9414 mRNA_1047: 9415 - K19054 FXN frataxin, at 272188 to 272699 9415 mRNA_1048: 9416 - KOG1812 Predicted E3 ubiquitin ligase, at 272884 to 273999 9416 mRNA_1049: 9417 - K12878 THOC1 THO complex subunit 1, at 274076 to 276723 9417
Group Condition mRNA_1045 mRNA_1046 mRNA_1047 mRNA_1048 mRNA_1049
9413
9414
9415
9416
9417
growth on ricinoleic acid YNB Glucose   -0.3   -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.3   -0.2 0.2
growth on oleic acid YNB Oleic Acid   0.1   0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation   -0.2   0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy   -0.3   0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0   -0.3 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.0   -0.2 0.1
auxotrophy Dropout Complete   -0.2   -0.1 0.3
growth on ypd YPD   -0.0   -0.1 0.0
growth on oleic acid YNB Glucose   -0.1   0.0 0.0
growth on ricinoleic acid YNB Ricinoleic Acid   -0.0   0.0 -0.0
auxotrophy YNB Glucose   -0.3   0.0 0.3
auxotrophy YNB Glucose 75mM Arginine   -0.2   -0.2 0.4
ypd buoyancy 40 hrs Median Buoyancy   -0.0   0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy   0.1   0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.6   -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.3   0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.5   0.7 0.5
facs on lipid accumulation Sorted Low BODIPY Gate   0.8   0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.8   0.5 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.6   0.5 0.4
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