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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1041: 9409 - K08504 BET1 blocked early in transport 1, at 260898 to 261462
9409
mRNA_1042: 9410 - Hypothetical Protein, at 261583 to 262732
9410
mRNA_1043: 9411 - K16732 PRC1 protein regulator of cytokinesis 1, at 262893 to 265321
9411
mRNA_1044: 9412 - K07765 MBTPS2 S2P endopeptidase, at 266610 to 267641
9412
mRNA_1045: 9413 - Hypothetical Protein, at 268181 to 268879
9413
Group
Condition
mRNA_1041
mRNA_1042
mRNA_1043
mRNA_1044
mRNA_1045
9409
9410
9411
9412
9413
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.3
0.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.1
-0.0
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.1
0.4
-0.4
growth on oleic acid
YNB Glucose
-0.5
-0.1
0.0
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
-0.0
-0.3
growth on ypd
YPD
-0.1
-0.1
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.1
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
0.3
-0.1
-0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.0
-0.1
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.1
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
-0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.0
-0.1
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.0
-0.1
0.4
growth on ricinoleic acid
YNB Glucose
0.2
0.0
0.1
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.1
0.1
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
-0.1
-0.3
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.2
0.0
0.7
auxotrophy
YNB Glucose
-0.1
0.0
0.1
0.7
auxotrophy
Dropout Complete
0.3
0.0
-0.1
0.5
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