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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1037: 9405 - K12160 SUMO, SMT3 small ubiquitin-related modifier, at 254364 to 255172
9405
mRNA_1038: 9406 - HMMPfam-Protein of unknown function (DUF2034)-PF10356, at 255756 to 256586
9406
mRNA_1039: 9407 - K18723 GLE1 nucleoporin GLE1, at 256702 to 258919
9407
mRNA_1040: 9408 - HMMPfam-NADH(P)-binding-PF13460,SUPERFAMILY--SSF51735, at 259080 to 260427
9408
mRNA_1041: 9409 - K08504 BET1 blocked early in transport 1, at 260898 to 261462
9409
Group
Condition
mRNA_1037
mRNA_1038
mRNA_1039
mRNA_1040
mRNA_1041
9405
9406
9407
9408
9409
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
-0.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.0
-0.9
growth on oleic acid
YNB Glucose
-0.3
-0.2
-0.5
auxotrophy
Dropout Complete
-1.0
-0.3
0.3
auxotrophy
YNB Glucose
-0.7
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.3
-0.2
growth on oleic acid
YNB Oleic Acid
-0.5
-0.2
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.5
0.1
growth on ypd
YPD
0.1
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
0.1
growth on ricinoleic acid
YNB Glucose
0.2
-0.3
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.0
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.1
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.0
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.6
0.2
-0.1
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