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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1022: 9390 - KOG1550 Extracellular protein SEL-1 and related proteins, at 224870 to 227887
9390
mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228517 to 230203
9391
mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230632 to 231986
9392
mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232781 to 233762
9393
mRNA_1026: 9394 - HMMPfam-Protein of unknown function (DUF3317)-PF11779, at 233944 to 234631
9394
Group
Condition
mRNA_1022
mRNA_1023
mRNA_1024
mRNA_1025
mRNA_1026
9390
9391
9392
9393
9394
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.7
-2.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-1.9
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.7
-0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.0
-0.7
-1.1
growth on oleic acid
YNB Oleic Acid
-0.6
-0.4
-1.0
auxotrophy
YNB Glucose 75mM Arginine
-1.1
-0.3
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.8
-0.1
-0.8
growth on oleic acid
YNB Glucose
-0.2
-0.7
-0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.9
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
-0.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.1
-0.6
auxotrophy
YNB Glucose
-0.7
-0.1
-0.2
auxotrophy
Dropout Complete
-0.5
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.3
-0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.4
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
-0.0
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.4
0.8
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.5
-0.1
growth on ypd
YPD
0.0
0.4
0.0
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